Hs03654211_m1

• Gene Symbol: TOM1
• Gene Name: target of myb1 membrane trafficking protein
• Gene Aliases: -
• Chromosome Location: Chr.22: 35299275 - 35347994 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TOM1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_024195.1		2 - 3	262		104
GenBank mRNA	AK295918.1	-	2 - 3	172		104

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DC336639.1	-	2 - 3	172		Chr. 22 - 35299894 - 35323874 [+] on Build GRCh38	104

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	HMG-box containing 4	HMGXB4	HMG2L1, HMGBCG, THC211630	-22.1kb	Sense	Chr. 22 - 35257274 - 35295807 on NCBI Build GRCh38
Downstream	microRNA 3909	MIR3909	mir-3909	12.5kb	Sense	Chr. 22 - 35335640 - 35335758 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200007196.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000257.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

intracellular protein transport
endocytosis
protein transport
endosomal transport

Function(s)

protein binding
clathrin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22004770.hg.1	ENST00000436462.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004770.hg.1	ENST00000451197.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22004770.hg.1	NR_024194.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004770.hg.1	NR_024195.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22004770.hg.1	TC22000257.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	TC2200007196.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	ENST00000439512.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	ENST00000449508.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	NR_024194.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	NR_024195.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	ENST00000439512.5	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	ENST00000449508.1	Ensembl
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	NR_024194.1	Refseq
Affymetrix Human Clariom D Assay	PSR2200150575.hg.1	NR_024195.1	Refseq