Hs03665185_m1

• Gene Symbol: B3GALT5-AS1
• Gene Name: B3GALT5 antisense RNA 1
• Gene Aliases: C21orf88
• Chromosome Location: Chr.21: 39597147 - 39612822 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: B3GALT5-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_026543.1		2 - 3	609		76
GenBank mRNA	BC062296.1	-	2 - 3	611		76
	BC080530.1	-	2 - 3	608		76

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	EL736457.1	-		152		Chr. - - [-] on Build	76
GenBankmRNA	BU174860.1	-	2 - 3	610		Chr. 21 - 39606118 - 39612823 [-] on Build GRCh38	76

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SH3 domain binding glutamate rich protein	SH3BGR	21-GARP	-90.3kb	Anti-sense	Chr. 21 - 39445865 - 39515506 on NCBI Build GRCh38
Downstream	beta-1,3-galactosyltransferase 5	B3GALT5	B3GalT-V, B3GalTx, B3T5, GLCT5, beta-1,3-GalTase 5, beta-3-Gx-T5, beta3Gal-T5	3.3kb	Anti-sense	Chr. 21 - 39612940 - 39662889 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2100008176.hg.1
This assay targets the same location as HTA transcript cluster(s) TC21000464.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR21005576.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21005576.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21005576.hg.1	TC21000464.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR21005575.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21005575.hg.1	ENST00000380604.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR21005575.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR21005575.hg.1	TC21000464.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000380612.8	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	ENST00000489821.4	Ensembl
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026542.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	TC2100008176.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100155315.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155315.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100155315.hg.1	TC2100008176.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100155315.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155315.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	NR_026543.1	Refseq
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	TC2100008176.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	ENST00000329618.6	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	ENST00000380604.7	Ensembl
Affymetrix Human Clariom D Assay	PSR2100155314.hg.1	NR_026543.1	Refseq