Hs03668114_s1

• Gene Symbol: STAMBP
• Gene Name: STAM binding protein
• Gene Aliases: AMSH, MICCAP
• Chromosome Location: Chr.2: 73828911 - 73873656 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: STAMBP
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_006463.4	NP_006454.1	11	4453		89
	NM_201647.2	NP_964010.1	10	4344		89
	NM_213622.2	NP_998787.1	10	4776		89
	XM_005264088.3	XP_005264145.1	10	4351		89
	XM_017003175.1	XP_016858664.1	11	4399		89
	XM_017003177.1	XP_016858666.1	11	4602		89
	XM_017003178.1	XP_016858667.1	10	4950		89
	XM_017003179.1	XP_016858668.1	11	4548		89
	XM_017003180.1	XP_016858669.1	10	4481		89
GenBank mRNA	AK023768.1	-	1	2147		89

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BQ361268.1	-	1	243		Chr. 2 - 73865001 - 73865590 [+] on Build GRCh38	89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	chromosome 2 open reading frame 78	C2orf78	COG5373, hCG1989538	-45.9kb	Sense	Chr. 2 - 73784189 - 73817148 on NCBI Build GRCh38
Downstream	actin, gamma 2, smooth muscle, enteric	ACTG2	ACT, ACTA3, ACTE, ACTL3, ACTSG, VSCM	25.8kb	Sense	Chr. 2 - 73892966 - 73919653 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as HTA transcript cluster(s) TC02000447.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene STAMBP

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

mitotic cytokinesis
JAK-STAT cascade
positive regulation of cell proliferation
negative regulation of phosphatidylinositol 3-kinase signaling
protein deubiquitination
negative regulation of neuron apoptotic process
negative regulation of Ras protein signal transduction

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding
metallopeptidase activity
protein domain specific binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR02006868.hg.1	TC02000447.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02006868.hg.1	ENST00000394070.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02006868.hg.1	NM_006463.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02006868.hg.1	NM_201647.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02006868.hg.1	NM_213622.3	Refseq