Hs03669859_m1

• Gene Symbol: LINC00942
• Gene Name: long intergenic non-protein coding RNA 942
• Gene Aliases: -
• Chromosome Location: Chr.12: 1500491 - 1504424 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC00942
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_028415.1		1 - 2	280		65
GenBank mRNA	AK090616.1	-	1 - 2	244		65
	BG332174.1	-		280		65
	BQ942184.1	-	1 - 2	186		65
	BQ954540.1	-	1 - 2	201		65

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BG331288.1	-		229		Chr. - - [-] on Build	65
GenBankmRNA	BG332613.1	-		274		Chr. - - [-] on Build	65
GenBankmRNA	CD172419.1	-	1 - 2	226		Chr. 12 - 1500545 - 1502837 [+] on Build GRCh38	65
GenBankmRNA	DA048213.1	-	1 - 2	245		Chr. 12 - 1500525 - 1502741 [+] on Build GRCh38	65
GenBankmRNA	BG490927.1	-		228		Chr. - - [-] on Build	65
GenBankmRNA	BG333013.1	-		228		Chr. - - [-] on Build	65
GenBankmRNA	BQ957371.1	-		214		Chr. - - [-] on Build	65
GenBankmRNA	DB016624.1	-	1 - 2	247		Chr. 12 - 1500525 - 1502740 [+] on Build GRCh38	65

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	ELKS/RAB6-interacting/CAST family member 1	ERC1	Cast2, ELKS, ERC-1, RAB6IP2	-4.6kb	Sense	Chr. 12 - 990010 - 1495933 on NCBI Build GRCh38
Downstream	Wnt family member 5B	WNT5B		26.4kb	Sense	Chr. 12 - 1617056 - 1647212 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1200006467.hg.1
This assay targets the same location as HTA transcript cluster(s) TC12000015.hg.1

• Set Membership: Amplicon length less than or equal to 70, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1200009577.hg.1	ENST00000515614.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009577.hg.1	ENST00000515614.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1200009577.hg.1	ENST00000515614.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200009577.hg.1	ENST00000515614.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200009577.hg.1	ENST00000515614.2	Ensembl
Affymetrix Human Clariom D Assay	TC1200009577.hg.1	ENST00000515614.2	Ensembl