Hs03671734_s1

• Gene Symbol: TAF1
• Gene Name: TATA-box binding protein associated factor 1
• Gene Aliases: BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, MRXS33, N-TAF1, NSCL2, OF, P250, TAF(II)250, TAF2A, TAFII-250, TAFII250, XDP
• Chromosome Location: Chr.X: 71366220 - 71530525 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: TAF1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104396.1		1	967		73
GenBank mRNA	AJ549246.2	-	1	967		73

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	inhibitor of growth family, X-linked (pseudogene)	INGX	ING1-like, ING2		Anti-sense	Chr. X - 71491681 - 71492449 on NCBI Build GRCh38
Downstream	O-linked N-acetylglucosamine (GlcNAc) transferase	OGT	HINCUT-1, HRNT1, O-GLCNAC	40.1kb	Sense	Chr. X - 71533062 - 71575897 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00007568.hg.1

• Set Membership: Amplicon length between 71 and 85, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

DNA-templated transcription, initiation
transcription from RNA polymerase II promoter
transcription initiation from RNA polymerase II promoter
transcription elongation from RNA polymerase II promoter
cellular response to DNA damage stimulus
cell cycle
viral process
histone acetylation
peptidyl-serine phosphorylation
peptidyl-threonine phosphorylation
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
positive regulation of transcription from RNA polymerase II promoter
protein autophosphorylation
RNA polymerase II transcriptional preinitiation complex assembly
positive regulation of transcription initiation from RNA polymerase II promoter
regulation of signal transduction by p53 class mediator

Function(s)

p53 binding
transcription coactivator activity
histone acetyltransferase activity
protein serine/threonine kinase activity
protein binding
ATP binding
transcription factor binding
TBP-class protein binding
sequence-specific DNA binding
transcription regulatory region DNA binding
lysine-acetylated histone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	ENST00000467309.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	ENST00000497222.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	NR_104396.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	ENST00000467309.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	ENST00000497222.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	NR_104396.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00152104.hg.1	TC0X00007568.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00152105.hg.1	ENST00000497222.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152105.hg.1	NR_104396.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00152105.hg.1	ENST00000497222.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00152105.hg.1	NR_104396.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00152105.hg.1	TC0X00007568.hg.1	Clariom D TC