Hs03676341_s1

• Gene Symbol: SMPDL3A
• Gene Name: sphingomyelin phosphodiesterase acid like 3A
• Gene Aliases: ASM3A, ASML3a, yR36GH4.1
• Chromosome Location: Chr.6: 122787180 - 122809720 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SMPDL3A
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_005266797.4	XP_005266854.1	1	49		79
GenBank mRNA	BC066591.1	-	1	550		79

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CF593329.1	-	1	91		Chr. 6 - 122789775 - 122803814 [+] on Build GRCh38	79
GenBankmRNA	CF994334.1	-		90		Chr. - - [-] on Build	79
GenBankmRNA	CD109889.1	-		90		Chr. - - [-] on Build	79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	fatty acid binding protein 7	FABP7	B-FABP, BLBP, FABPB, MRG	-5.2kb	Sense	Chr. 6 - 122749201 - 122784077 on NCBI Build GRCh38
Downstream	clavesin 2	CLVS2	C6orf212, C6orf213, RLBP1L2, bA160A10.4	205.2kb	Sense	Chr. 6 - 122993693 - 123081282 on NCBI Build GRCh38

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_005266797.4 transcripts.

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

hydrolase, phosphodiesterase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

sphingomyelin catabolic process
biological_process
nucleoside triphosphate catabolic process

Function(s)

sphingomyelin phosphodiesterase activity
protein binding
phosphoric diester hydrolase activity
zinc ion binding