Hs03859854_s1

• Gene Symbol: NACC2
• Gene Name: NACC family member 2
• Gene Aliases: BEND9, BTBD14, BTBD14A, BTBD31, NAC-2, RBB
• Chromosome Location: Chr.9: 136006537 - 136095285 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: NACC2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_144653.4	NP_653254.1	6	3301		95
	XM_011518221.2	XP_011516523.1	6	3321		95
GenBank mRNA	AK094914.1	-	1	454		95

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	HY139632.1	-	1	387		Chr. 9 - 136010042 - 136010521 [-] on Build GRCh38	95
GenBankmRNA	DA399580.1	-	1	304		Chr. 9 - 136009947 - 136010438 [-] on Build GRCh38	95
GenBankmRNA	BF345463.1	-				Chr. - - [-] on Build	96
GenBankmRNA	DB476693.1	-	1	60		Chr. 9 - 136009700 - 136010193 [-] on Build GRCh38	95
GenBankmRNA	DA410900.1	-	1	60		Chr. 9 - 136009643 - 136010194 [-] on Build GRCh38	95
GenBankmRNA	BI029061.1	-	1			Chr. 9 - 136009868 - 136010304 [+] on Build GRCh38	95
GenBankmRNA	BX474817.1	-	1	162		Chr. 9 - 136009717 - 136010296 [-] on Build GRCh38	95
GenBankmRNA	DB235878.1	-	1	61		Chr. 9 - 136009638 - 136010195 [-] on Build GRCh38	95
GenBankmRNA	DB470380.1	-	1	60		Chr. 9 - 136009768 - 136010193 [-] on Build GRCh38	95

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	UBA domain containing 1	UBAC1	GBDR1, UBADC1	-45.7kb	Sense	Chr. 9 - 135932969 - 135961380 on NCBI Build GRCh38
Downstream	uncharacterized LOC105376323	LOC105376323		97.2kb	Sense	Chr. 9 - 136107829 - 136109424 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900011962.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene NACC2

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
positive regulation of cell proliferation
negative regulation of cell proliferation
posttranscriptional regulation of gene expression
histone deacetylation
cellular protein complex localization
negative regulation of transcription, DNA-templated
protein homooligomerization
negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcription factor activity, RNA polymerase II transcription factor binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
histone deacetylase activity
protein binding
protein homodimerization activity
histone deacetylase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000467669.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	ENST00000467669.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000467669.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	ENST00000467669.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	TC0900011962.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	ENST00000277554.3	Ensembl
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	ENST00000371753.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	NM_144653.4	Refseq
Affymetrix Human Clariom D Assay	PSR0900181791.hg.1	TC0900011962.hg.1	Clariom D TC