Hs04232219_s1

• Gene Symbol: MIR3936
• Gene Name: microRNA 3936
• Gene Aliases: mir-3936
• Chromosome Location: Chr.5: 132365490 - 132365599 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR3936
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_037500.1		1	59		63

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW439969.1	-	2			Chr. 5 - 132360487 - 132365680 [+] on Build GRCh38	63
GenBankmRNA	AI934947.1	-				Chr. - - [-] on Build	63
GenBankmRNA	AI819925.1	-				Chr. - - [-] on Build	63

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	uncharacterized LOC553103	LOC553103			Sense	Chr. 5 - 132311276 - 132369916 on NCBI Build GRCh38
Downstream	solute carrier family 22 member 5	SLC22A5	CDSP, OCTN2	4.1kb	Anti-sense	Chr. 5 - 132369704 - 132395614 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0500012011.hg.1
This assay targets the same location as HTA transcript cluster(s) TC05001765.hg.1

• Set Membership: Amplicon length less than or equal to 70, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0500012011.hg.1	ENST00000584304.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0500012011.hg.1	NR_037500.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR05023894.hg.1	TC05001765.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR05023894.hg.1	NR_037500.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500182880.hg.1	ENST00000584304.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500182880.hg.1	NR_037500.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500182880.hg.1	ENST00000584304.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0500182880.hg.1	NR_037500.1	Refseq
Affymetrix Human Clariom D Assay	PSR0500182880.hg.1	TC0500012011.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0500012011.hg.1	ENST00000584304.1	Ensembl
Affymetrix Human Clariom D Assay	TC0500012011.hg.1	NR_037500.1	Refseq