MIR1238
Genomic Map
Back To TopAssay Details
| Gene Symbol: MIR1238 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_031603.1 | 1 | 41 | 66 | ||
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | autophagy related 4D cysteine peptidase | ATG4D |
APG4-D, APG4D, AUTL4 |
Sense | Chr. 19 - 10543894 - 10553423 on NCBI Build GRCh38 | |
| Downstream | KRI1 homolog | KRI1 | 881.0 | Anti-sense | Chr. 19 - 10553085 - 10566031 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.This assay targets the same location as Clariom D transcript cluster(s) TC1900006990.hg.1
This assay targets the same location as HTA transcript cluster(s) TC19000179.hg.1
Set Membership: |
Amplicon length less than or equal to 70
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Chr array_18 19 21 | A_17_P31495695 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495696 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495699 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495702 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495700 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495685 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881678 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495698 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881667 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881669 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881668 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881664 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881680 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881676 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495703 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881665 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881673 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495687 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881679 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881663 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881675 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881672 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881670 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495683 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881677 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881666 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495701 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881681 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881674 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881671 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495696 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881669 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881666 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881668 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881664 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881665 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881678 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881667 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881671 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881680 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881663 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881677 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495703 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881680 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881669 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495699 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881679 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495702 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495695 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881667 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881676 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881673 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881678 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881666 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495700 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495698 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881670 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881672 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495696 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881682 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881668 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881674 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881664 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881665 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495687 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495685 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881681 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881671 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495701 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881675 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P31495683 | - | - |
| Agilent Whole Chr array_18 19 21 | A_17_P10881663 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495698 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881681 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881677 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881664 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881678 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881673 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495696 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881667 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881682 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495701 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881665 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495702 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P31495695 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881666 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881668 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881669 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881670 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881680 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881663 | - | - |
| Agilent SurePrint G3 Human Promoter Microarray 1x1M | A_17_P10881671 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | TC1900006990.hg.1 | ENST00000408483.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC1900006990.hg.1 | NR_031603.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002723.hg.1 | ENST00000408483.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002723.hg.1 | NR_031603.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR19002723.hg.1 | TC19000179.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | TC1900006990.hg.1 | ENST00000408483.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC1900006990.hg.1 | NR_031603.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900149748.hg.1 | ENST00000408483.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900149748.hg.1 | NR_031603.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1900149748.hg.1 | TC1900006990.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1900149748.hg.1 | ENST00000408483.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1900149748.hg.1 | NR_031603.1 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3309304 | NR_031603.1 | human_transcriptome |
| HumanHT-12 V4.0 expression beadchip | ILMN_3309304 | NR_031603.1 | human_transcriptome |
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