Hs04402176_m1

• Gene Symbol: SPIDR
• Gene Name: scaffolding protein involved in DNA repair
• Gene Aliases: KIAA0146
• Chromosome Location: Chr.8: 47260878 - 47736001 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SPIDR
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_104581.1		7 - 8	1020		108
GenBank mRNA	BC031627.1	-	7 - 8	945		108

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	patched 1 pseudogene	LOC100287846		-403.0kb	Sense	Chr. 8 - 47189307 - 47192816 on NCBI Build GRCh38
Downstream	CCAAT/enhancer binding protein delta	CEBPD	C/EBP-delta, CELF, CRP3, NF-IL6-beta	63.0kb	Anti-sense	Chr. 8 - 47736914 - 47738164 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0800007529.hg.1

• Set Membership: Amplicon length greater than or equal to 101, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Gene Ontology Categories:

Process(es)

double-strand break repair via homologous recombination
cellular response to DNA damage stimulus
regulation of double-strand break repair via homologous recombination
positive regulation of protein complex assembly
regulation of establishment of protein localization to chromosome
cellular response to ionizing radiation
cellular response to hydroxyurea
cellular response to camptothecin
positive regulation of double-strand break repair

Function(s)

protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000297423.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000517693.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000518074.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519141.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519362.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519401.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000521214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000521550.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000522117.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000524126.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000524141.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000541342.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001080394.3	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001282916.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001282919.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NR_104581.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000297423.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000517693.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000518074.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519141.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519362.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000519401.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000521214.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000521550.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000522117.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000524126.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000524141.5	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	ENST00000541342.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001080394.3	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001282916.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NM_001282919.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	NR_104581.1	Refseq
Affymetrix Human Clariom D Assay	PSR0800152051.hg.1	TC0800007529.hg.1	Clariom D TC