Hs04406768_s1

• Gene Symbol: BGLT3
• Gene Name: beta globin locus transcript 3 (non-protein coding)
• Gene Aliases: BGL3, LINC01083, lncRNA-BGL3
• Chromosome Location: Chr.11: 5244554 - 5245546 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BGLT3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_121648.1		1	522		132
GenBank mRNA	BU658638.1	-	1	532		132
	KF110790.1	-	1	3199		132

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	H47525.1	-	1	234		Chr. 11 - 5244903 - 5245258 [-] on Build GRCh38	133
GenBankmRNA	H91360.1	-	1			Chr. 11 - 5244867 - 5245211 [-] on Build GRCh38	132
GenBankmRNA	U01317.3	-	2	44229		Chr. 11 - 5215910 - 5289430 [-] on Build GRCh38	132
GenBankmRNA	AA678291.1	-	1			Chr. 11 - 5244959 - 5245150 [+] on Build GRCh38	132

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	hemoglobin subunit beta pseudogene 1	HBBP1	HBH1, HBHP	-962.0	Sense	Chr. 11 - 5241954 - 5243592 on NCBI Build GRCh38
Downstream	hemoglobin subunit gamma 1	HBG1	HBG-T2, HBGA, HBGR, HSGGL1, PRO2979	2.7kb	Sense	Chr. 11 - 5248272 - 5249857 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1100009920.hg.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Clariom D Assay	PSR1100174874.hg.1	ENST00000564523.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100174874.hg.1	NR_121648.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100174874.hg.1	ENST00000564523.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1100174874.hg.1	NR_121648.1	Refseq
Affymetrix Human Clariom D Assay	PSR1100174874.hg.1	TC1100009920.hg.1	Clariom D TC