Hs04407357_s1

• Gene Symbol: MIR558
• Gene Name: microRNA 558
• Gene Aliases: MIRN558, hsa-mir-558
• Chromosome Location: Chr.2: 32532153 - 32532246 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: MIR558
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_030285.1		1	48		91

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DA573150.1	-	1	85		Chr. 2 - 32532126 - 32532718 [+] on Build GRCh38	91
GenBankmRNA	DB127417.1	-	1	365		Chr. 2 - 32531851 - 32532377 [+] on Build GRCh38	91

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Yip1 domain family member 4	YIPF4	FinGER4, Nbla11189	-224.8kb	Sense	Chr. 2 - 32277889 - 32307929 on NCBI Build GRCh38
Downstream	BIRC6 antisense RNA 2	BIRC6-AS2	linc-birc6, megamind	25.3kb	Anti-sense	Chr. 2 - 32557520 - 32574818 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay is designed to target a precursor miRNA (pre-miRNA) target. It may not discriminate between the primary transcript (pri-miRNA) and the pre-miRNA for this miRNA. If you are looking for an assay to detect the mature miRNA, please search the MicroRNA collection of assays.
This assay targets the same location as Clariom D transcript cluster(s) TC0200007191.hg.1
This assay targets the same location as HTA transcript cluster(s) TC02000214.hg.1

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0200007191.hg.1	ENST00000384920.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0200007191.hg.1	NR_030285.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR02003164.hg.1	TC02000214.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR02003164.hg.1	ENST00000384920.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR02003164.hg.1	NR_030285.1	Refseq
Affymetrix Human Clariom D Assay	TC0200007191.hg.1	ENST00000384920.1	Ensembl
Affymetrix Human Clariom D Assay	TC0200007191.hg.1	NR_030285.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200149629.hg.1	ENST00000384920.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200149629.hg.1	NR_030285.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200149629.hg.1	ENST00000384920.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0200149629.hg.1	NR_030285.1	Refseq
Affymetrix Human Clariom D Assay	PSR0200149629.hg.1	TC0200007191.hg.1	Clariom D TC