Hs04409504_s1

• Gene Symbol: SYP-AS1
• Gene Name: SYP antisense RNA 1
• Gene Aliases: -
• Chromosome Location: Chr.X: 49198839 - 49202454 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SYP-AS1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046649.1		2	625		79
GenBank mRNA	AI018666.1	-	1			79

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	synaptophysin	SYP	MRX96, MRXSYP	-2.0kb	Anti-sense	Chr. X - 49187812 - 49200202 on NCBI Build GRCh38
Downstream	calcium voltage-gated channel subunit alpha1 F	CACNA1F	AIED, COD3, COD4, CORDX, CORDX3, CSNB2, CSNB2A, CSNBX2, Cav1.4, Cav1.4alpha1, JM8, JMC8, OA2	2.6kb	Anti-sense	Chr. X - 49205063 - 49233404 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0X00007223.hg.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	TC0X00007223.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149553.hg.1	TC0X00007223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149554.hg.1	TC0X00007223.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	ENST00000433499.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	NR_046649.1	Refseq
Affymetrix Human Clariom D Assay	PSR0X00149555.hg.1	TC0X00007223.hg.1	Clariom D TC