Hs04942965_s1

• Gene Symbol: LINC01040
• Gene Name: long intergenic non-protein coding RNA 1040
• Gene Aliases: TCONS_00021682
• Chromosome Location: Chr.13: 89477607 - 89500509 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: LINC01040
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_131228.1		2	318		89
GenBank mRNA	AI478937.1	-	1			89
	BG205080.1	-	1	185		89
	BG212965.1	-	1	185		89

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BG181805.1	-	1	182		Chr. 13 - 89477777 - 89478116 [-] on Build GRCh38	89
GenBankmRNA	BG194317.1	-		218		Chr. - - [-] on Build	89
GenBankmRNA	BG205079.1	-	1	169		Chr. 13 - 89477468 - 89478124 [-] on Build GRCh38	89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	Sp3 transcription factor pseudogene	SP3P		-114.1kb	Sense	Chr. 13 - 89359753 - 89363502 on NCBI Build GRCh38
Downstream	long intergenic non-protein coding RNA 353	LINC00353		70.7kb	Sense	Chr. 13 - 89548794 - 89564413 on NCBI Build GRCh38

More Information

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1300009433.hg.1	ENST00000425048.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009433.hg.1	ENST00000425048.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1300009433.hg.1	NR_131228.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1300009433.hg.1	NR_131228.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009433.hg.1	ENST00000425048.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009433.hg.1	ENST00000425048.1	Ensembl
Affymetrix Human Clariom D Assay	TC1300009433.hg.1	NR_131228.1	Refseq
Affymetrix Human Clariom D Assay	TC1300009433.hg.1	NR_131228.1	Refseq