Mm00439395_g1

• Gene Symbol: Slc6a4
• Gene Name: solute carrier family 6 (neurotransmitter transporter, serotonin), member 4
• Gene Aliases: 5-HTT, AI323329, Htt, Sert
• Chromosome Location: Chr.11: 76998466 - 77032345 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc6a4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010484.2	NP_034614.2	6 - 7	1160		56
GenBank mRNA	AF013604.1	-	5 - 6	973		56
	BC108978.1	-	6 - 7	1142	40047534	56
	BC108979.1	-	6 - 7	1142	40047537	56
	X66119.1	-	5 - 6	754		56

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1100001111.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Transporter, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc6a4

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

transport
neurotransmitter transport
serotonin transport
memory
circadian rhythm
response to toxic substance
positive regulation of gene expression
organic cation transport
monoamine transport
thalamus development
negative regulation of cerebellar granule cell precursor proliferation
negative regulation of synaptic transmission, dopaminergic
social behavior
sodium ion transmembrane transport
vasoconstriction
sperm ejaculation
negative regulation of neuron differentiation
positive regulation of cell cycle
negative regulation of organ growth
brain morphogenesis
protein oligomerization
protein homooligomerization
serotonin uptake
cellular response to organic substance
cellular response to cGMP
ammonium transmembrane transport

Function(s)

neurotransmitter:sodium symporter activity
serotonin:sodium symporter activity
protein binding
monoamine transmembrane transporter activity
serotonin transmembrane transporter activity
symporter activity
myosin binding
syntaxin-1 binding
Rab GTPase binding
cocaine binding
protein homodimerization activity
nitric-oxide synthase binding
actin filament binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100010106.mm.1	NM_010484.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100010106.mm.1	NM_010484.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1100010106.mm.1	TC1100001111.mm.1	MTA TC