Mm00440338_m1 Best Coverage

• Gene Symbol: Myd88
• Gene Name: myeloid differentiation primary response gene 88
• Gene Aliases: -
• Chromosome Location: Chr.9: 119335988 - 119340040 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Myd88
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010851.2	NP_034981.1	1 - 2	408		90
GenBank mRNA	AK090107.1	-	1 - 2	371		90
	AK150083.1	-	1 - 2	291		90
	AK151748.1	-	1 - 2	364		90
	AK152596.1	-	1 - 2	393		90
	AK167929.1	-	1 - 2	388		90
	BC005591.1	-	1 - 2	408	3482246	90
	BC051075.1	-	1 - 2	355		90
	BC058787.1	-	1 - 2	343	6309465	90
	DQ790885.1	-	1 - 2	327		90
	U84409.1	-	1 - 2	389		90
	X51397.1	-	1 - 2	277		90

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0900003241.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, Mouse Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Myd88

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

response to molecule of fungal origin
immune system process
MyD88-dependent toll-like receptor signaling pathway
inflammatory response
immune response
signal transduction
cell surface receptor signaling pathway
transmembrane receptor protein serine/threonine kinase signaling pathway
JNK cascade
Toll signaling pathway
response to virus
immunoglobulin mediated immune response
cytokine-mediated signaling pathway
lipopolysaccharide-mediated signaling pathway
response to peptidoglycan
response to lipopolysaccharide
positive regulation of interleukin-17 production
positive regulation of interleukin-23 production
positive regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
regulation of cell proliferation
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of growth of symbiont in host
positive regulation of chemokine biosynthetic process
innate immune response
type I interferon biosynthetic process
positive regulation of JNK cascade
positive regulation of smooth muscle cell proliferation
positive regulation of lymphocyte proliferation
regulation of inflammatory response
defense response to Gram-positive bacterium
positive regulation of NF-kappaB transcription factor activity
response to interleukin-1
3'-UTR-mediated mRNA stabilization
establishment of endothelial intestinal barrier

Function(s)

receptor binding
Toll binding
interleukin-1 receptor binding
protein binding
identical protein binding
TIR domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0900027281.mm.1	NM_010851.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027281.mm.1	NM_010851.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027281.mm.1	TC0900003241.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027278.mm.1	NM_010851.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027278.mm.1	NM_010851.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027278.mm.1	TC0900003241.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027279.mm.1	NM_010851.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027279.mm.1	NM_010851.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027279.mm.1	TC0900003241.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027280.mm.1	NM_010851.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027280.mm.1	NM_010851.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027280.mm.1	TC0900003241.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0900027283.mm.1	NM_010851.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027283.mm.1	NM_010851.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0900027283.mm.1	TC0900003241.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	586768	-	-