Mm00446826_m1 Best Coverage

• Gene Symbol: Nr5a1
• Gene Name: nuclear receptor subfamily 5, group A, member 1
• Gene Aliases: Ad4BP, ELP, ELP-3, Ftz-F1, Ftzf1, SF-1, SF1
• Chromosome Location: Chr.2: 38692656 - 38714560 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nr5a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_139051.3	NP_620639.1	3 - 4	447		77
GenBank mRNA	AB000490.1	-	3 - 4	491		77
	AF511594.1	-	3 - 4	277		77
	AK134378.1	-	3 - 4	448		77
	AK144376.1	-	3 - 4	408		77
	AK156911.1	-	3 - 4	415		77
	BC110476.1	-	3 - 4	390	40047261	77
	BC110477.1	-	3 - 4	390	40047262	77
	D10584.1	-	2 - 3	677		77

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200003423.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Nuclear Receptor, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nr5a1

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

luteinization
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
male gonad development
tissue development
multicellular organism aging
reproductive process
cell differentiation
adrenal gland development
hormone metabolic process
steroid hormone mediated signaling pathway
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
maintenance of protein location in nucleus
positive regulation of male gonad development
negative regulation of female gonad development

Function(s)

DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
steroid hormone receptor activity
protein binding
phospholipid binding
zinc ion binding
lipid binding
enzyme binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200029350.mm.1	NM_139051.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029350.mm.1	NM_139051.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029350.mm.1	TC0200003423.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200029347.mm.1	NM_139051.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029347.mm.1	NM_139051.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029347.mm.1	TC0200003423.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200029348.mm.1	NM_139051.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029348.mm.1	NM_139051.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029348.mm.1	TC0200003423.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200029351.mm.1	NM_139051.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029351.mm.1	NM_139051.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200029351.mm.1	TC0200003423.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	496916	-	-