Mm00450504_g1

• Gene Symbol: Rfx5
• Gene Name: regulatory factor X, 5 (influences HLA class II expression)
• Gene Aliases: -
• Chromosome Location: Chr.3: 94951957 - 94961561 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rfx5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017395.2	NP_059091.2	6 - 7	573		61
GenBank mRNA	AB221679.1	-	6 - 7	554		61
	AF209854.1	-	6 - 7	554		61
	AK088686.1	-	6 - 7	739		61
	BC051965.1	-	7 - 8	610	5702640	61
	BC057336.1	-	7 - 8	599		61
	BC075717.1	-	8 - 9	682		61
	BC118948.2	-	6 - 7	554	40092396	61
	BC118949.2	-	6 - 7	554	40092397	61

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000881.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rfx5

Panther Classification:

Molecular Function -

winged helix/forkhead transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
DNA binding
transcription factor activity, sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300006829.mm.1	NM_017395.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006829.mm.1	NM_017395.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006829.mm.1	TC0300000881.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300006830.mm.1	NM_017395.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006830.mm.1	NM_017395.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006830.mm.1	TC0300000881.mm.1	MTA TC