Mm00457902_m1

• Gene Symbol: Ctss
• Gene Name: cathepsin S
• Gene Aliases: -
• Chromosome Location: Chr.3: 95526786 - 95556405 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ctss
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021281.3	NP_067256.4	1 - 2	138		95
GenBank mRNA	AF038546.1	-	1 - 2	80		95
	AJ002386.1	-	1 - 2	94		95
	AK028366.1	-	1 - 2	140		95
	AK152191.1	-	1 - 2	91		95
	BC002125.1	-	1 - 2	47	3495719	95
	BC011104.1	-	1 - 2	55		95

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000903.mm.1

Additional Information:

This assay is in the 5'UTR region of the AF038546.1,AJ002386.1,AK028366.1,BC002125.1,NM_021281.3 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protease, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ctss

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

proteolysis
immune response
response to acidic pH
protein processing
antigen processing and presentation
collagen catabolic process
basement membrane disassembly
bone resorption
antigen processing and presentation of peptide antigen
positive regulation of inflammatory response
proteolysis involved in cellular protein catabolic process
regulation of sensory perception of pain
positive regulation of cation channel activity

Function(s)

fibronectin binding
cysteine-type endopeptidase activity
collagen binding
peptidase activity
cysteine-type peptidase activity
hydrolase activity
laminin binding
proteoglycan binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300007167.mm.1	NM_001267695.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007167.mm.1	NM_021281.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007167.mm.1	TC0300000903.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300007170.mm.1	NM_001267695.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007170.mm.1	NM_021281.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007170.mm.1	TC0300000903.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300007168.mm.1	NM_001267695.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007168.mm.1	NM_021281.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300007168.mm.1	TC0300000903.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	585818	-	-