Mm00477798_m1 Best Coverage

• Gene Symbol: Nfkbia
• Gene Name: nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha
• Gene Aliases: AI462015, Nfkbi
• Chromosome Location: Chr.12: 55489409 - 55492647 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nfkbia
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010907.2	NP_035037.2	2 - 3	457		70
GenBank mRNA	AK089215.1	-	2 - 3	406		70
	AK151115.1	-	2 - 3	410		70
	AK151608.1	-	2 - 3	410		70
	AK161622.1	-	2 - 3	369		70
	BC046754.1	-	2 - 3	390	5693175	70
	U36277.1	-	2 - 3	401		70

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200001768.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfkbia

Gene Ontology Categories:

Process(es)

protein import into nucleus, translocation
cytoplasmic sequestering of NF-kappaB
regulation of gene expression
negative regulation of macrophage derived foam cell differentiation
positive regulation of cholesterol efflux
negative regulation of lipid storage
lipopolysaccharide-mediated signaling pathway
negative regulation of NF-kappaB transcription factor activity
positive regulation of cellular protein metabolic process
response to muramyl dipeptide
response to lipopolysaccharide
toll-like receptor 4 signaling pathway
response to muscle stretch
regulation of cell proliferation
cytoplasmic sequestering of transcription factor
response to exogenous dsRNA
negative regulation of myeloid cell differentiation
negative regulation of Notch signaling pathway
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
nucleotide-binding oligomerization domain containing 1 signaling pathway
nucleotide-binding oligomerization domain containing 2 signaling pathway

Function(s)

protein binding
nuclear localization sequence binding
enzyme binding
heat shock protein binding
ubiquitin protein ligase binding
protein complex binding
identical protein binding
NF-kappaB binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1200012185.mm.1	NM_010907.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012185.mm.1	NM_010907.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012185.mm.1	TC1200001768.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200012182.mm.1	NM_010907.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012182.mm.1	NM_010907.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012182.mm.1	TC1200001768.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200012184.mm.1	NM_010907.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012184.mm.1	NM_010907.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012184.mm.1	TC1200001768.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200012183.mm.1	NM_010907.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012183.mm.1	NM_010907.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1200012183.mm.1	TC1200001768.mm.1	MTA TC