Mm00488044_m1 Best Coverage

• Gene Symbol: Rlim
• Gene Name: ring finger protein, LIM domain interacting
• Gene Aliases: AL022832, AW743871, Ha1r, Rlim1, Rnf12
• Chromosome Location: Chr.X: 103957164 - 103981297 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rlim
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011276.3	NP_035406.3	4 - 5	560		69
GenBank mRNA	AF069992.1	-	4 - 5	515		69
	AK013207.1	-	4 - 5	532		69
	AK029295.1	-	4 - 5	554		69
	BC012960.1	-	2 - 3	293	4193003	69

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00002789.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rlim

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
ubiquitin-dependent protein catabolic process
protein ubiquitination
negative regulation of sequence-specific DNA binding transcription factor activity
random inactivation of X chromosome
regulation of dosage compensation by inactivation of X chromosome

Function(s)

ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00017605.mm.1	NM_011276.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017605.mm.1	NM_011276.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017605.mm.1	TC0X00002789.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00017606.mm.1	NM_011276.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017606.mm.1	NM_011276.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00017606.mm.1	TC0X00002789.mm.1	MTA TC