Mm00489299_m1 Best Coverage

• Gene Symbol: Col5a1
• Gene Name: collagen, type V, alpha 1
• Gene Aliases: AI413331
• Chromosome Location: Chr.2: 27886395 - 28039510 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Col5a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015734.2	NP_056549.2	13 - 14	2057		67
GenBank mRNA	AB009993.1	-	13 - 14	1797		67
	BC138447.1	-	13 - 14	1731	8861467	67
	BC138449.1	-	13 - 14	1731	8861469	67
	BQ885116.1	-	1 - 2	51		67

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200000478.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Col5a1

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Process(es)

blood vessel development
heart morphogenesis
cell adhesion
cell migration
collagen fibril organization
collagen biosynthetic process
wound healing, spreading of epidermal cells
tendon development
extracellular fibril organization
skin development
integrin biosynthetic process
eye morphogenesis
regulation of cellular component organization
negative regulation of endodermal cell differentiation

Function(s)

extracellular matrix structural constituent
protein binding
heparin binding
proteoglycan binding
platelet-derived growth factor binding