Mm00489803_g1

• Gene Symbol: Sec61a1
• Gene Name: Sec61 alpha 1 subunit (S. cerevisiae)
• Gene Aliases: AA408394, AA410007, Sec61a
• Chromosome Location: Chr.6: 88503607 - 88518800 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sec61a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_016906.4	NP_058602.1	1 - 2	116		66
GenBank mRNA	AB032902.1	-	1 - 2	128		66
	AK088473.1	-	1 - 2	117		66
	AK153055.1	-	1 - 2	106		66
	AK159349.1	-	1 - 2	104		66
	BC003707.1	-	1 - 2	42	3592772	66

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002683.mm.1

Additional Information:

This assay is in the 5'UTR region of the AB032902.1,AK088473.1,AK153055.1,AK159349.1,BC003707.1,NM_016906.4 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Sec61a1

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

SRP-dependent cotranslational protein targeting to membrane
posttranslational protein targeting to membrane
transport
endoplasmic reticulum organization
protein transport
cell growth

Function(s)

ribosome binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600020850.mm.1	TC0600002683.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600020850.mm.1	NM_016906.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020850.mm.1	NM_016906.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020848.mm.1	TC0600002683.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600020848.mm.1	NM_016906.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020848.mm.1	NM_016906.4	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020851.mm.1	TC0600002683.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600020851.mm.1	NM_016906.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600020851.mm.1	NM_016906.4	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	459562	-	-