Mm00490093_m1

• Gene Symbol: Smarcal1
• Gene Name: SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
• Gene Aliases: 6030401P21Rik, AI851716, Mharp
• Chromosome Location: Chr.1: 72536687 - 72636790 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Smarcal1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_018817.2	NP_061287.2	7 - 8	1609		75
GenBank mRNA	AF088884.1	-	7 - 8	1589		75
	AK042332.1	-	7 - 8	1588		75
	AK077878.1	-	7 - 8	1587		75
	AK083488.1	-	7 - 8	1587		75
	AK154020.1	-	7 - 8	1592		75
	AK161570.1	-	7 - 8	1529		75
	BC029078.1	-	7 - 8	1544	3992325	75

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100000608.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Smarcal1

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)

DNA strand renaturation
DNA metabolic process
DNA repair
regulation of transcription from RNA polymerase II promoter
cellular response to DNA damage stimulus
replication fork processing

Function(s)

nucleotide binding
DNA binding
helicase activity
ATP binding
DNA-dependent ATPase activity
hydrolase activity
annealing helicase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100004882.mm.1	NM_018817.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100004882.mm.1	NM_018817.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100004882.mm.1	TC0100000608.mm.1	MTA TC