Mm00493917_m1 Best Coverage

• Gene Symbol: Ttc3
• Gene Name: tetratricopeptide repeat domain 3
• Gene Aliases: 2610202A04Rik, AA409221, D16Ium21, D16Ium21e, TPRD, mKIAA4119
• Chromosome Location: Chr.16: 94370739 - 94469222 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ttc3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009441.2	NP_033467.2	15 - 16	1434		98
GenBank mRNA	AB008516.1	-	14 - 15	1311		98
	AK053765.1	-	15 - 16	1538		98
	AK084201.1	-	5 - 6	469		98
	AK088273.1	-	14 - 15	1381		98
	AK165850.1	-	4 - 5	342		98
	AK166120.1	-	5 - 6	374		98
	AK166164.1	-	6 - 7	523		98
	AK220495.1	-	15 - 16	1476		98
	BC019173.1	-	15 - 16	1403		98
	BC037654.1	-	14 - 15	1336		98
	BC057207.1	-	14 - 15	1338		98

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600001057.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ttc3

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
negative regulation of cell morphogenesis involved in differentiation
negative regulation of neuron differentiation
protein K48-linked ubiquitination

Function(s)

ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600008308.mm.1	NM_009441.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600008308.mm.1	NM_009441.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600008308.mm.1	TC1600001057.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600008309.mm.1	NM_009441.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600008309.mm.1	NM_009441.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600008309.mm.1	TC1600001057.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	394042	-	-