Mm00494136_m1

• Gene Symbol: Vhl
• Gene Name: von Hippel-Lindau tumor suppressor
• Gene Aliases: Vhlh
• Chromosome Location: Chr.6: 113624021 - 113631633 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vhl
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009507.3	NP_033533.1	1 - 2	358		83
GenBank mRNA	AK159238.1	-	1 - 2	379		83
	AK161408.1	-	1 - 2	355		83
	AK171264.1	-	1 - 2	360		83
	AK171604.1	-	1 - 2	368		83
	BC052417.1	-	1 - 2	357	6402536	83
	S76748.1	-	1 - 2	358		83
	U12570.1	-	1 - 2	374		83

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600001257.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vhl

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
angiogenesis
response to hypoxia
type B pancreatic cell differentiation
pancreatic A cell differentiation
regulation of transcription, DNA-templated
NLS-bearing protein import into nucleus
proteasomal protein catabolic process
protein transport
protein ubiquitination
protein catabolic process
neuron differentiation
extracellular matrix organization
regulation of catecholamine metabolic process
blood vessel endothelial cell migration
negative regulation of endothelial cell differentiation
positive regulation of transcription, DNA-templated
protein heterooligomerization
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia
regulation of thymocyte apoptotic process
negative regulation of thymocyte apoptotic process
negative regulation of hypoxia-inducible factor-1alpha signaling pathway
regulation of apoptotic signaling pathway

Function(s)

protein binding
transcription factor binding
enzyme binding
protein complex binding
ubiquitin protein ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600009885.mm.1	TC0600001257.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600009885.mm.1	NM_009507.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600009885.mm.1	NM_009507.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0600009888.mm.1	TC0600001257.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600009888.mm.1	NM_009507.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600009888.mm.1	NM_009507.3	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	758119	-	-