Mm00497159_m1 Best Coverage

• Gene Symbol: Ddb1
• Gene Name: damage specific DNA binding protein 1
• Gene Aliases: 127kDa, AA408517, p127-Ddb1
• Chromosome Location: Chr.19: 10605568 - 10629822 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ddb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015735.1	NP_056550.1	18 - 19	2356		88
GenBank mRNA	AB026432.1	-	18 - 19	2356		88
	AF159853.1	-	18 - 19	2316		88
	AK145328.1	-	6 - 7	654		88
	AK146522.1	-	18 - 19	2414		88
	AK154303.1	-	18 - 19	2382		88
	AK155020.1	-	18 - 19	2437		88
	AK155920.1	-	18 - 19	2397		88
	AK157491.1	-	18 - 19	2436		88
	BC009661.1	-	18 - 19	2363	3487617	88

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000205.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ddb1

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

DNA repair
nucleotide-excision repair
cellular response to DNA damage stimulus
Wnt signaling pathway
histone H2A monoubiquitination
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
negative regulation of apoptotic process
proteasome-mediated ubiquitin-dependent protein catabolic process
positive regulation of viral genome replication
positive regulation by virus of viral protein levels in host cell
interaction with symbiont
UV-damage excision repair
regulation of mitotic cell cycle phase transition
positive regulation of viral release from host cell

Function(s)

nucleic acid binding
DNA binding
damaged DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900002585.mm.1	NM_015735.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002585.mm.1	NM_015735.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002585.mm.1	TC1900000205.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900002584.mm.1	NM_015735.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002584.mm.1	NM_015735.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900002584.mm.1	TC1900000205.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	923027	-	-