Mm00500910_m1 Best Coverage

• Gene Symbol: Ocln
• Gene Name: occludin
• Gene Aliases: AI503564, Ocl
• Chromosome Location: Chr.13: 100496504 - 100553689 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ocln
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008756.2	NP_032782.1	5 - 6	1219		83
GenBank mRNA	AK019880.1	-	5 - 6	1171		83
	AK033532.1	-	5 - 6	1152		83
	AK042576.1	-	5 - 6	1219		83
	AK145798.1	-	3 - 4	378		83
	BC138679.1	-	5 - 6	1202	8861700	83
	BC138680.1	-	5 - 6	1202	8861701	83
	BC145371.1	-	5 - 6	1217	9053929	83
	U49185.1	-	5 - 6	1262		83

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1300002536.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ocln

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

methylation
cell-cell junction organization
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
bicellular tight junction assembly

Function(s)

protein binding
thiopurine S-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
protein domain specific binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300017223.mm.1	NM_008756.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017223.mm.1	NM_008756.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017223.mm.1	TC1300002536.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300017224.mm.1	NM_008756.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017224.mm.1	NM_008756.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017224.mm.1	TC1300002536.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300017221.mm.1	NM_008756.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017221.mm.1	NM_008756.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017221.mm.1	TC1300002536.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300017222.mm.1	NM_008756.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017222.mm.1	NM_008756.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1300017222.mm.1	TC1300002536.mm.1	MTA TC