Mm00503891_m1

Gene Symbol:

Cbx6 Npcd

Gene Name:

chromobox 6

neuronal pentraxin chromo domain

Gene Aliases:

-

Cbx6-Nptxr

Chromosome Location:

Chr.15: 79823898 - 79834333 on Build GRCm38

Chromosome Location:

Chr.15: 79786351 - 79834333 on Build GRCm38

Species:

Mouse

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Cbx6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_028763.3	NP_083039.2	4 - 5	367		104
GenBank mRNA	AK004679.2	-	4 - 5	272		104
	AK035250.1	-	4 - 5	274		104
	BC011199.1	-	4 - 5	256		104
	BC048240.1	-	4 - 5	264	6493113	104

Gene Symbol: Npcd
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001013362.2	NP_001013380.2	4 - 5	367		104
GenBank mRNA	AY394489.1	-	4 - 5	272		104
	AY395907.1	-	4 - 5	272		104

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500001887.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Apoptosis, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cbx6
Click here to find siRNAs for Gene Npcd

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
chromatin modification
biological_process

Function(s)

single-stranded RNA binding
protein domain specific binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500014855.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014855.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014855.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014861.mm.1	NM_001013362.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014861.mm.1	NM_001013362.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014861.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014861.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014861.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014859.mm.1	NM_001013362.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014859.mm.1	NM_001013362.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014859.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014859.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014859.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014856.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014856.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014856.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014854.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014854.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014854.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014857.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014857.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014857.mm.1	TC1500001887.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500014860.mm.1	NM_001013362.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014860.mm.1	NM_001013362.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014860.mm.1	NM_028763.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014860.mm.1	NM_028763.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500014860.mm.1	TC1500001887.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	926154	-	-