Mm00504690_g1

• Gene Symbol: Rbm39
• Gene Name: RNA binding motif protein 39
• Gene Aliases: 1500012C14Rik, 2310040E03Rik, B330012G18Rik, C79248, R75070, Rnpc2, caper
• Chromosome Location: Chr.2: 156147239 - 156180238 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rbm39
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001291114.1	NP_001278043.1	5 - 6	726		83
	NM_001291115.1	NP_001278044.1	5 - 6	521		83
	NM_133242.3	NP_573505.2	5 - 6	726		83
GenBank mRNA	AK081994.1	-	1 - 2	463		83
	AK135289.1	-	4 - 5	352		83
	AK146046.1	-	5 - 6	521		83
	AK147076.1	-	5 - 6	671		83
	AK154989.1	-	5 - 6	657		83
	BC004000.1	-	1 - 2	58		83
	BC023205.1	-	5 - 6	628		83
	BC030493.1	-	3 - 4	341	5400675	83
	BC082607.1	-	3 - 4	316	30667785	83
	BC086645.1	-	5 - 6	649	6817169	83
	BC092268.1	-	3 - 4	475		83

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0200004983.mm.1

Additional Information:

This assay is in the 5'UTR region of the BC082607.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbm39

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
mRNA processing
RNA splicing
regulation of nucleic acid-templated transcription

Function(s)

nucleotide binding
nucleic acid binding
transcription coactivator activity
RNA binding
protein binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0200042571.mm.1	NM_133242.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200042571.mm.1	TC0200004983.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200042566.mm.1	NM_133242.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200042566.mm.1	TC0200004983.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0200042568.mm.1	NM_133242.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0200042568.mm.1	TC0200004983.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	528719	-	-