Mm00505235_m1

• Gene Symbol: Ptcd1
• Gene Name: pentatricopeptide repeat domain 1
• Gene Aliases: 1110069M14Rik
• Chromosome Location: Chr.5: 145147378 - 145167119 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptcd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133735.2	NP_598496.3	1 - 2	151		73
GenBank mRNA	AK088764.1	-	1 - 2	70		73
	AK143877.1	-	1 - 2	108		73
	AK150514.1	-	1 - 2	108		73
	AK151064.1	-	1 - 2	120		73
	AK152077.1	-	1 - 2	120		73
	AK153366.1	-	1 - 2	120		73
	AK171484.1	-	1 - 2	106		73
	AK172986.1	-		73		73
	BC004766.1	-	1 - 2	69	3156304	73
	BC083097.1	-	1 - 2	110	30459747	73

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500003590.mm.1

Additional Information:

This assay is in the 5'UTR region of the AK088764.1,AK150514.1,AK171484.1,BC004766.1,BC083097.1,NM_133735.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptcd1

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

tRNA processing
biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0500032938.mm.1	TC0500003590.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500032938.mm.1	NM_133735.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032938.mm.1	NM_133735.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032941.mm.1	TC0500003590.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500032941.mm.1	NM_133735.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032941.mm.1	NM_133735.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032942.mm.1	TC0500003590.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500032942.mm.1	NM_133735.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032942.mm.1	NM_133735.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032943.mm.1	TC0500003590.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500032943.mm.1	NM_133735.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032943.mm.1	NM_133735.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032937.mm.1	TC0500003590.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500032937.mm.1	NM_133735.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0500032937.mm.1	NM_133735.2	Refseq

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	904724	-	-