Mm00511995_m1 Best Coverage

• Gene Symbol: Syvn1
• Gene Name: synovial apoptosis inhibitor 1, synoviolin
• Gene Aliases: 1200010C09Rik, AW211966, C85322, D530017H19Rik, Hrd1
• Chromosome Location: Chr.19: 6045030 - 6053718 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Syvn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164709.1	NP_001158181.1	5 - 6	631		63
	NM_028769.5	NP_083045.4	5 - 6	998		63
GenBank mRNA	AK004688.2	-	5 - 6	485		63
	AK122558.1	-	4 - 5	600		63
	AK143720.1	-	5 - 6	510		63
	AK172097.1	-	4 - 5	597		63
	BC042199.1	-	5 - 6	493	4953165	63
	BC046829.1	-	5 - 6	631	6811574	63
	BC057917.1	-	5 - 6	912	5136398	63
	BC080722.1	-	5 - 6	516	5323695	63

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000094.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Syvn1

Gene Ontology Categories:

Process(es)

in utero embryonic development
response to unfolded protein
multicellular organism development
protein ubiquitination
protein N-linked glycosylation via asparagine
protein catabolic process
ER-associated ubiquitin-dependent protein catabolic process
retrograde protein transport, ER to cytosol
negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway

Function(s)

protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
activating transcription factor binding
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
ATPase binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900001089.mm.1	NM_001164709.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001089.mm.1	NM_001164709.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001089.mm.1	NM_028769.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001089.mm.1	NM_028769.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001089.mm.1	TC1900000094.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	431194	-	-