Mm00514634_m1 Best Coverage

• Gene Symbol: Ecm1
• Gene Name: extracellular matrix protein 1
• Gene Aliases: AI663821, p85
• Chromosome Location: Chr.3: 95734147 - 95739819 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ecm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001252653.1	NP_001239582.1	1 - 2	195		66
	NM_007899.2	NP_031925.2	1 - 2	195		66
GenBank mRNA	AK153009.1	-	1 - 2	194		66
	AK153471.1	-	1 - 2	194		66
	AK159334.1	-	1 - 2	194		66
	AK169939.1	-	1 - 2	197		66
	BC138693.1	-	1 - 2	181	8861715	66
	BC145381.1	-	1 - 2	181	9053939	66
	BY224903.1	-	1 - 2	196		66
	L33416.1	-	1 - 2	188		66

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002482.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ecm1

Gene Ontology Categories:

Process(es)

ossification
angiogenesis
positive regulation of endothelial cell proliferation
negative regulation of cytokine-mediated signaling pathway
regulation of type 2 immune response
regulation of transcription from RNA polymerase II promoter
inflammatory response
signal transduction
negative regulation of peptidase activity
regulation of bone mineralization
negative regulation of bone mineralization
biomineral tissue development
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of angiogenesis
regulation of T cell migration

Function(s)

protease binding
signal transducer activity
interleukin-2 receptor binding
protein C-terminus binding
enzyme binding
laminin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300019268.mm.1	NM_001252653.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300019268.mm.1	NM_007899.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300019268.mm.1	TC0300002482.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300019269.mm.1	NM_001252653.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300019269.mm.1	NM_007899.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300019269.mm.1	TC0300002482.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	839811	-	-