Mm00516619_m1

• Gene Symbol: Ercc4
• Gene Name: excision repair cross-complementing rodent repair deficiency, complementation group 4
• Gene Aliases: AI606920, Xpf
• Chromosome Location: Chr.16: 13109689 - 13152009 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ercc4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_015769.2	NP_056584.2	1 - 2	407		87
GenBank mRNA	AF189285.1	-	1 - 2	407		87
	AK018375.1	-	1 - 2	227		87
	AK043366.1	-	1 - 2	209		87
	AK138588.1	-	1 - 2	201		87
	AK149326.1	-	1 - 2	240		87
	BC026792.1	-	1 - 2	198	4911382	87

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1600000149.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ercc4

Panther Classification:

Molecular Function -

DNA metabolism protein, endodeoxyribonuclease, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

resolution of meiotic recombination intermediates
telomere maintenance
double-strand break repair via homologous recombination
DNA metabolic process
DNA repair
nucleotide-excision repair
nucleotide-excision repair, DNA incision, 3'-to lesion
nucleotide-excision repair, DNA incision, 5'-to lesion
cellular response to DNA damage stimulus
response to UV
UV protection
negative regulation of telomere maintenance
nucleotide-excision repair, DNA incision
cellular response to UV
nucleotide-excision repair involved in interstrand cross-link repair

Function(s)

single-stranded DNA endodeoxyribonuclease activity
TFIID-class transcription factor binding
nucleic acid binding
DNA binding
damaged DNA binding
single-stranded DNA binding
nuclease activity
endonuclease activity
endodeoxyribonuclease activity
protein binding
protein C-terminus binding
hydrolase activity
phosphoric ester hydrolase activity
structure-specific DNA binding
T/G mismatch-specific endonuclease activity
retroviral 3' processing activity
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1600001032.mm.1	NM_015769.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001032.mm.1	NM_015769.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001032.mm.1	TC1600000149.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001037.mm.1	NM_015769.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001037.mm.1	NM_015769.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001037.mm.1	TC1600000149.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001035.mm.1	NM_015769.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001035.mm.1	NM_015769.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001035.mm.1	TC1600000149.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1600001036.mm.1	NM_015769.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001036.mm.1	NM_015769.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1600001036.mm.1	TC1600000149.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	345151	-	-