Mm00518793_g1

• Gene Symbol: Apobec3
• Gene Name: apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3
• Gene Aliases: Arp3, BC003314, Cem15, Rfv3
• Chromosome Location: Chr.15: 79892408 - 79908905 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Apobec3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001160415.1	NP_001153887.1	7 - 8	1217		73
	NM_030255.3	NP_084531.2	6 - 7	1118		73
GenBank mRNA	AB461446.1	-	7 - 8	1108		73
	AB461447.1	-	6 - 7	1009		73
	AB461448.1	-	6 - 7	1009		73
	AB461449.1	-	6 - 7	1009		73
	AK044394.1	-	7 - 8	1177		73
	AK049256.1	-	6 - 7	1078		73
	AK049998.1	-		1072		73
	AK153719.1	-	6 - 7	1068		73
	AK154035.1	-		1222		73
	AK167986.1	-	6 - 7	1124		73
	BC003314.1	-	7 - 8	1199	3155422	73
	BC007182.1	-	2 - 3	1354		73
	EU707568.1	-	7 - 8	1108		73
	EU707569.1	-	6 - 7	940		73
	EU707570.1	-	6 - 7	1009		73
	EU707571.1	-	6 - 7	940		73
	GQ871501.1	-	7 - 8	1105		73
	GQ871502.1	-	5 - 6	949		73
	GQ871503.1	-	6 - 7	1006		73

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500000688.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Apobec3

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

hematopoietic progenitor cell differentiation
immune system process
metabolic process
negative regulation of transposition
negative regulation of viral genome replication
innate immune response
defense response to virus

Function(s)

catalytic activity
GTP cyclohydrolase activity
protein binding
tRNA-specific adenosine deaminase activity
zinc ion binding
hydrolase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
N-cyclopropylmelamine deaminase activity
N-cyclopropylammeline deaminase activity
N-cyclopropylammelide alkylamino hydrolase activity
2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase activity
tRNA-specific adenosine-37 deaminase activity
archaeal-specific GTP cyclohydrolase activity
poly(A) RNA binding
metal ion binding
deoxycytidine deaminase activity
tRNA-specific adenosine-34 deaminase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500005150.mm.1	NM_001160415.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005150.mm.1	NM_001160415.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005150.mm.1	NM_030255.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005150.mm.1	NM_030255.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500005150.mm.1	TC1500000688.mm.1	MTA TC