Mm00524993_m1

• Gene Symbol: Rorb
• Gene Name: RAR-related orphan receptor beta
• Gene Aliases: Nr1f2, RZR-beta, RZRB, Rorbeta
• Chromosome Location: Chr.19: 18930609 - 19111196 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rorb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001043354.2	NP_001036819.1	2 - 3	730		74
	NM_001289921.1	NP_001276850.1	3 - 4	249		74
	NM_146095.4	NP_666207.3	2 - 3	196		74
GenBank mRNA	AB258405.1	-	2 - 3	357		74
	AK044421.1	-	2 - 3	191		74
	AK134790.1	-	2 - 3	496		74
	BC024768.1	-	3 - 4	232		74
	BC024842.1	-	3 - 4	249	5358124	74
	BC058269.1	-	1 - 2	103		74
	DQ779923.1	-	1 - 2	100		74
	DQ779924.1	-	2 - 3	125		74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900001231.mm.1

Additional Information:

This assay is in the 5'UTR region of the BC024842.1,NM_001289921.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Nuclear Receptor, Mammalian Gene Collection, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rorb

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
G-protein coupled receptor signaling pathway
multicellular organism development
visual perception
amacrine cell differentiation
eye photoreceptor cell development
regulation of circadian rhythm
steroid hormone mediated signaling pathway
negative regulation of osteoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
retinal rod cell development
retinal cone cell development
rhythmic process
response to stimulus
retina development in camera-type eye
cellular response to retinoic acid

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
transcription factor binding
zinc ion binding
melatonin receptor activity
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900011196.mm.1	NM_001043354.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011196.mm.1	NM_001043354.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011196.mm.1	TC1900001231.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900011189.mm.1	NM_001043354.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011189.mm.1	NM_001043354.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011189.mm.1	NM_146095.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011189.mm.1	NM_146095.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1900011189.mm.1	TC1900001231.mm.1	MTA TC