Trim50
Genomic Map
Back To TopAssay Details
| Gene Symbol: Trim50 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_178240.2 | NP_839971.1 | 2 - 3 | 497 | 65 | |
| GenBank mRNA | AY081947.1 | - | 2 - 3 | 497 | 65 | |
| BC130022.1 | - | 2 - 3 | 500 | 40140742 | 65 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0500001581.mm.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Mammalian Gene Collection
Mus musculus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
regulation of establishment of protein localization
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity
regulation of establishment of protein localization
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2131642 | NM_178240.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2131642 | AY081947.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_55_P2131642 | BC130022.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 249053 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 477601 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 445361 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 859101 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 824120 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 360604 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 263518 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 880627 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 557872 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 186051 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 143473 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P154712 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P129779 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2131642 | NM_178240.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2131642 | AY081947.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_55_P2131642 | BC130022.1 | mouse_transcriptome |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116015 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115953 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116012 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115954 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115950 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116018 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115961 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115951 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116025 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116020 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115962 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116013 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116016 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116007 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116009 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115957 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115958 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116022 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116017 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24116014 | - | - |
| Agilent Mouse Promoter ChIP-on-Chip A) | A_68_P24115956 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P01228468 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P129779 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P154712 | - | - |
| Whole Mouse Genome G4122A | A_51_P322500 | NM_178240.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P322500 | AY081947.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P322500 | BC130022.1 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P114465 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P129779 | - | - |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P154712 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04528243 | - | - |
| Agilent Mouse Proximal Promoter ChIP-on-Chip A) | A_68_P04528236 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115929 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116067 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115967 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115973 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115937 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116003 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116044 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116056 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115965 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115905 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116011 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115930 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116017 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115947 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115940 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115957 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116061 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115944 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116010 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116000 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115995 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115922 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115986 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115909 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116036 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115954 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115961 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115918 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115956 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115985 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115983 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116055 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115921 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115990 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116007 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116064 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115943 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115933 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116057 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115907 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115993 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116065 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116070 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116040 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115988 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116034 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115978 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116068 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116037 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115913 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116020 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115987 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116013 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115975 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115920 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116076 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115977 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116072 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115932 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116005 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115903 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115950 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116041 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116059 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116022 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116015 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115998 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115966 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116046 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115971 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116009 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116050 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24116025 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115927 | - | - |
| Agilent Mouse Whole Genome ChIP-on-Chip | A_68_P24115951 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115944 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115965 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115977 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611947 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115982 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115958 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115961 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04811105 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115956 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115963 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115998 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116022 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611942 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04528237 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611938 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115981 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04781424 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116025 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04847158 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115957 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115962 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115971 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116009 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115980 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115959 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04781421 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115966 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611932 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04781423 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116000 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115970 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115950 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04528239 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04886918 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115993 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116003 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04746730 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115995 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115972 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115975 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115997 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611934 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04611944 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04528243 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04755485 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P04713999 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24116005 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115946 | - | - |
| Agilent Six_ChIP_01_of_03_v2 | A_68_P24115945 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10526341 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526344 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526342 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526340 | - | - |
| Affymetrix Mouse Gene 1.0 ST Array | 10526343 | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10526339 | - | - |
| Affymetrix Mouse Clariom S Array | PSR0500014201.mm.1 | TC0500001581.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0500014201.mm.1 | NM_178240.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0500014201.mm.1 | NM_178240.2 | Refseq |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 466666 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 2360167 | - | - |
| Illumina mouseRef-8 v1.0 expression beadchip | 0002360167 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2442967 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2442967 | - | - |
| mouse-6 v1.1 (Illumina) | scl27133.6.1_203-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 2360167 | - | - |
| Illumina Sentrix MouseRef-8 Expression BeadChip | scl27133.6.1_203-S | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 2360167 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_2442967 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2442967 | - | - |
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