Mm00659716_m1 Best Coverage

• Gene Symbol: Usp47
• Gene Name: ubiquitin specific peptidase 47
• Gene Aliases: 4930502N04Rik, A630020C16Rik
• Chromosome Location: Chr.7: 112022808 - 112111386 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Usp47
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133758.3	NP_598519.2	20 - 21	3298		81
	NM_177249.3	NP_796223.2	21 - 22	3358		81
GenBank mRNA	AK030909.1	-	5 - 6	1249		81
	AK030963.1	-	1 - 2	130		81
	AK131138.1	-	11 - 12	1975		81
	BC024117.1	-	4 - 5	1124		81
	BC057362.1	-	1 - 2	382		81
	BC089364.1	-	1 - 2	172		81
	BC108425.1	-	21 - 22	3299	30062566	81

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700001640.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Protease, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Usp47

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

DNA repair
base-excision repair
proteolysis
ubiquitin-dependent protein catabolic process
cellular response to DNA damage stimulus
negative regulation of G2/M transition of mitotic cell cycle
protein deubiquitination
positive regulation of cell growth
cellular response to UV
monoubiquitinated protein deubiquitination
response to drug
negative regulation of apoptotic process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of transcription, DNA-templated
regulation of proteasomal protein catabolic process
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Function(s)

cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity
peptidase activity
cysteine-type peptidase activity
hydrolase activity
thiol-dependent ubiquitinyl hydrolase activity
WD40-repeat domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700013622.mm.1	TC0700001640.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700013622.mm.1	NM_133758.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700013622.mm.1	NM_133758.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0700013622.mm.1	NM_177249.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700013622.mm.1	NM_177249.3	Refseq