Mm00805002_m1

• Gene Symbol: Kdm4a
• Gene Name: lysine (K)-specific demethylase 4A
• Gene Aliases: D4Ertd222e, JHDM3A, Jmjd2, Jmjd2a, mKIAA0677
• Chromosome Location: Chr.4: 118136957 - 118180043 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Kdm4a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001161823.1	NP_001155295.1	2 - 3	335		74
	NM_172382.2	NP_759014.2	2 - 3	335		74
GenBank mRNA	AK054095.1	-	2 - 3	299		74
	AK129187.1	-	2 - 3	190		74
	AK145066.1	-	2 - 3	321		74
	AK145947.1	-	2 - 3	257		74
	BC028866.1	-	2 - 3	238	4207552	74
	BY308642.1	-	2 - 3	336		74

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0400003385.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Kdm4a

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
positive regulation of gene expression
cardiac muscle hypertrophy in response to stress
chromatin modification
histone demethylation
positive regulation of neuron differentiation
negative regulation of transcription, DNA-templated
negative regulation of astrocyte differentiation
oxidation-reduction process
negative regulation of cell death
histone H3-K36 demethylation

Function(s)

sulfonate dioxygenase activity
double-stranded DNA binding
zinc ion binding
oxidoreductase activity
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
ubiquitin protein ligase binding
histone demethylase activity
hypophosphite dioxygenase activity
methylated histone binding
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
histone demethylase activity (H3-K36 specific)
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0400027322.mm.1	TC0400003385.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400027322.mm.1	NM_001161823.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027322.mm.1	NM_001161823.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027322.mm.1	NM_172382.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027322.mm.1	NM_172382.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027316.mm.1	TC0400003385.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400027316.mm.1	NM_001161823.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027316.mm.1	NM_001161823.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027316.mm.1	NM_172382.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027316.mm.1	NM_172382.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027321.mm.1	TC0400003385.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400027321.mm.1	NM_001161823.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027321.mm.1	NM_001161823.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027321.mm.1	NM_172382.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027321.mm.1	NM_172382.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027320.mm.1	TC0400003385.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400027320.mm.1	NM_001161823.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027320.mm.1	NM_001161823.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027320.mm.1	NM_172382.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027320.mm.1	NM_172382.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027317.mm.1	TC0400003385.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0400027317.mm.1	NM_001161823.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027317.mm.1	NM_001161823.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027317.mm.1	NM_172382.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0400027317.mm.1	NM_172382.2	Refseq