Mm01136030_g1

• Gene Symbol: Zkscan3
• Gene Name: zinc finger with KRAB and SCAN domains 3
• Gene Aliases: 2810435N07Rik, AA408594, AI132359, Skz1, Zf47, Zfp-47, Zfp306, Zfp307, mszf35
• Chromosome Location: Chr.13: 21387004 - 21402755 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Zkscan3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001145778.1	NP_001139250.1	4 - 5	776		113
	NM_023685.4	NP_076174.3	4 - 5	773		113
GenBank mRNA	AK028902.1	-	4 - 5	763		113
	AK031080.1	-	4 - 5	734		113
	AK031286.1	-	4 - 5	731		113
	AK050028.1	-	4 - 5	735		113
	AK182625.1	-	1 - 2	71		113
	AK220177.1	-	4 - 5	940		113
	BC007473.1	-	4 - 5	731	3496252	113
	BG296820.1	-	3 - 4	269		113

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1300001537.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Zkscan3

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
autophagy
lysosome organization
negative regulation of autophagy
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
negative regulation of cellular senescence

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
nucleic acid binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1300009730.mm.1	NM_001145778.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009730.mm.1	NM_001145778.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009730.mm.1	NM_023685.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009730.mm.1	NM_023685.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009730.mm.1	TC1300001537.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1300009731.mm.1	NM_001145778.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009731.mm.1	NM_001145778.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009731.mm.1	NM_023685.4.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009731.mm.1	NM_023685.4	Refseq
Affymetrix Mouse Clariom S Array	PSR1300009731.mm.1	TC1300001537.mm.1	MTA TC