Mm01188605_m1

• Gene Symbol: Pdzrn3
• Gene Name: PDZ domain containing RING finger 3
• Gene Aliases: 1110020C07Rik, AI429718, AL023082, LNX3, SEMACAP3, Semcap3
• Chromosome Location: Chr.6: 101149607 - 101377897 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pdzrn3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_018884.2	NP_061372.2	1 - 2	733		107
GenBank mRNA	AF127084.1	-	1 - 2	733		107
	AF127085.1	-	2 - 3	577		107
	AK135776.1	-	1 - 2	178		107
	AK143226.1	-	1 - 2	247		107
	AK173098.1	-	1 - 2	692		107
	HM560981.1	-	1 - 2	724		107

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002861.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Transporter, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pdzrn3

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

neuromuscular junction development
protein ubiquitination

Function(s)

ubiquitin-protein transferase activity
protein binding
zinc ion binding
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
ligase activity
ribosomal S6-glutamic acid ligase activity
coenzyme F420-0 gamma-glutamyl ligase activity
coenzyme F420-2 alpha-glutamyl ligase activity
metal ion binding
ubiquitin protein ligase activity
protein-glycine ligase activity
protein-glycine ligase activity, initiating
protein-glycine ligase activity, elongating
tubulin-glycine ligase activity
protein-glutamic acid ligase activity
tubulin-glutamic acid ligase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600022025.mm.1	TC0600002861.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022025.mm.1	NM_018884.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022025.mm.1	NM_018884.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022024.mm.1	TC0600002861.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022024.mm.1	NM_018884.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022024.mm.1	NM_018884.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022026.mm.1	TC0600002861.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600022026.mm.1	NM_018884.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600022026.mm.1	NM_018884.2	Refseq