Mm01215370_g1

• Gene Symbol: Kdm5d
• Gene Name: lysine (K)-specific demethylase 5D
• Gene Aliases: HY, Jarid1d, Smcy
• Chromosome Location: Chr.Y: 897660 - 943813 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Kdm5d
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_011419.3	NP_035549.1	22 - 23	3602		126
GenBank mRNA	AB221606.1	-	8 - 9	1255		126
	AF127244.1	-	22 - 23	3440		126
	BC059077.1	-	14 - 15	2417	6826863	126
	BC060077.1	-		3688		126
	CA316252.1	-	4 - 5			126

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0Y00000005.mm.1
This assay targets the same location as RTA transcript cluster(s) TC0Y00000005.rn

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Kdm5d

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

chromatin modification
histone H3-K4 demethylation
oxidation-reduction process

Function(s)

sulfonate dioxygenase activity
DNA binding
zinc ion binding
oxidoreductase activity
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
histone demethylase activity (H3-K4 specific)
hypophosphite dioxygenase activity
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity