Mm01218235_m1

• Gene Symbol: Shox2
• Gene Name: short stature homeobox 2
• Gene Aliases: 6330543G17Rik, OG12, Og12x, Prx3, SHOT
• Chromosome Location: Chr.3: 66971723 - 66981771 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Shox2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_013665.1	NP_038693.1	2 - 3	768		138
GenBank mRNA	AA509933.1	-	2 - 3	252		138
	AK032007.1	-	2 - 3	315		138
	AK045937.1	-	1 - 2	210		138
	AK145063.1	-	2 - 3	264		138
	U66918.1	-	2 - 3	768		138
	U67055.1	-	2 - 3	283		138

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300002111.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shox2

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
osteoblast differentiation
positive regulation of mesenchymal cell proliferation
chondrocyte differentiation
chondrocyte development
heart valve development
cardiac atrium morphogenesis
regulation of transcription, DNA-templated
multicellular organism development
embryonic limb morphogenesis
regulation of chondrocyte differentiation
embryonic forelimb morphogenesis
positive regulation of smoothened signaling pathway
positive regulation of transcription from RNA polymerase II promoter
embryonic digestive tract morphogenesis
embryonic morphogenesis
positive regulation of skeletal muscle fiber development
positive regulation of axonogenesis
embryonic skeletal joint morphogenesis
cartilage development involved in endochondral bone morphogenesis
muscle tissue morphogenesis
regulation of branching morphogenesis of a nerve

Function(s)

DNA binding
sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300015947.mm.1	NM_013665.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300015947.mm.1	NM_013665.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300015947.mm.1	TC0300002111.mm.1	MTA TC