Mm01221908_m1 Best Coverage

• Gene Symbol: Ercc6
• Gene Name: excision repair cross-complementing rodent repair deficiency, complementation group 6
• Gene Aliases: 4732403I04, C130058G22Rik, CSB
• Chromosome Location: Chr.14: 32513288 - 32580990 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ercc6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001081221.1	NP_001074690.1	5 - 6	1474		89
GenBank mRNA	AK028576.1	-	5 - 6	1466		89

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1400000347.mm.1

• Set Membership: Amplicon length between 86 and 100, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Gene Ontology Categories:

Process(es)

response to superoxide
DNA repair
transcription-coupled nucleotide-excision repair
base-excision repair
pyrimidine dimer repair
transcription elongation from RNA polymerase I promoter
cellular response to DNA damage stimulus
response to oxidative stress
activation of JNKK activity
activation of JUN kinase activity
intrinsic apoptotic signaling pathway in response to DNA damage
response to UV
response to toxic substance
response to X-ray
response to UV-B
response to gamma radiation
regulation of DNA-templated transcription, elongation
positive regulation of DNA-templated transcription, elongation
multicellular organism growth
photoreceptor cell maintenance
positive regulation of protein tyrosine kinase activity

Function(s)

DNA binding
chromatin binding
ATP binding
protein C-terminus binding
DNA-dependent ATPase activity
protein tyrosine kinase activator activity
protein complex binding
protein N-terminus binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1400003067.mm.1	NM_001081221.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1400003067.mm.1	NM_001081221.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1400003067.mm.1	TC1400000347.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1400003069.mm.1	NM_001081221.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1400003069.mm.1	NM_001081221.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1400003069.mm.1	TC1400000347.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	385271	-	-