Mm01236839_m1 Best Coverage

• Gene Symbol: Ehd1
• Gene Name: EH-domain containing 1
• Gene Aliases: AA409636, Past1, RME-1
• Chromosome Location: Chr.19: 6276896 - 6300096 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ehd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_010119.5	NP_034249.1	2 - 3	581		70
GenBank mRNA	AF099186.1	-	2 - 3	584		70
	AF173156.1	-	2 - 3	592		70
	AK012896.1	-	2 - 3	557		70
	AK077536.1	-	2 - 3	561		70
	AK088980.1	-	3 - 4	723		70
	AK152821.1	-	2 - 3	530		70
	AK154651.1	-	2 - 3	570		70
	AK159191.1	-	2 - 3	556		70
	AK159943.1	-	2 - 3	566		70
	AK160535.1	-	2 - 3	569		70
	AK166701.1	-	2 - 3	567		70
	AK167721.1	-	2 - 3	573		70
	AK168610.1	-	2 - 3	557		70
	AK170679.1	-	2 - 3	357		70
	AK171047.1	-	2 - 3	585		70
	AK172539.1	-	2 - 3	557		70
	AK172669.1	-	2 - 3	743		70
	BC037094.1	-	2 - 3	568		70
	BC043332.1	-	2 - 3	551	4981832	70
	BC054828.1	-	2 - 3	545	5042951	70

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900000111.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ehd1

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

intracellular protein transport
endocytosis
positive regulation of cholesterol storage
endosomal transport
neuron projection development
endocytic recycling
low-density lipoprotein particle clearance
cholesterol homeostasis
protein homooligomerization
positive regulation of myoblast fusion
cellular response to nerve growth factor stimulus
positive regulation of endocytic recycling

Function(s)

nucleotide binding
calcium ion binding
protein binding
ATP binding
GTP binding
Rab GTPase binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900001282.mm.1	NM_010119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001282.mm.1	NM_010119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001282.mm.1	TC1900000111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900001285.mm.1	NM_010119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001285.mm.1	NM_010119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001285.mm.1	TC1900000111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900001289.mm.1	NM_010119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001289.mm.1	NM_010119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001289.mm.1	TC1900000111.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900001286.mm.1	NM_010119.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001286.mm.1	NM_010119.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1900001286.mm.1	TC1900000111.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	913732	-	-