Mm01252592_m1 Best Coverage

• Gene Symbol: Trim47
• Gene Name: tripartite motif-containing 47
• Gene Aliases: 2210023F24Rik
• Chromosome Location: Chr.11: 116105750 - 116110235 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Trim47
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001205081.1	NP_001192010.1	1 - 2	701		95
	NM_172570.5	NP_766158.3	1 - 2	701		95
GenBank mRNA	AK031572.1	-	1 - 2	676		95
	AK075838.1	-	1 - 2	130		95
	BC064728.1	-	1 - 2	95		95
	BC080731.1	-	1 - 2	97		95
	BC100317.1	-	1 - 2	685		95
	BC132148.1	-	1 - 2	482	40130425	95
	BC137953.1	-	1 - 2	482	8860972	95
	BC145059.1	-	1 - 2	480	9053607	95

More Information

Additional Information:

This assay is in the 5'UTR region of the AK075838.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Trim47

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

zinc ion binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1100038678.mm.1	NM_001205081.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038678.mm.1	NM_001205081.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038678.mm.1	NM_172570.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038678.mm.1	NM_172570.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038678.mm.1	TC1100004301.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100038680.mm.1	NM_001205081.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038680.mm.1	NM_001205081.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038680.mm.1	NM_172570.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038680.mm.1	NM_172570.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038680.mm.1	TC1100004301.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1100038677.mm.1	NM_001205081.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038677.mm.1	NM_001205081.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038677.mm.1	NM_172570.5.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038677.mm.1	NM_172570.5	Refseq
Affymetrix Mouse Clariom S Array	PSR1100038677.mm.1	TC1100004301.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	930248	-	-