Mm01261019_g1

• Gene Symbol: Rorc
• Gene Name: RAR-related orphan receptor gamma
• Gene Aliases: Nr1f3, RORgamma, TOR, Thor
• Chromosome Location: Chr.3: 94372715 - 94398276 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rorc
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001293734.1	NP_001280663.1	2 - 3	256		95
	NM_011281.3	NP_035411.2	3 - 4	252		95
	NR_121656.1		2 - 3	256		95
GenBank mRNA	AF163668.1	-	2 - 3	183		95
	AJ132394.1	-	2 - 3	256		95
	AK137866.1	-	2 - 3	229		95
	AK153941.1	-	3 - 4	314		95
	AK160122.1	-	3 - 4	210		95
	BC014804.1	-	3 - 4	195	4489193	95
	CJ098183.1	-	3 - 4	220		95
	U39071.1	-	3 - 4	228		95
	U43508.1	-	3 - 4	190		95

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000864.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Nuclear Receptor, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rorc

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
protein phosphorylation
xenobiotic metabolic process
multicellular organism development
regulation of glucose metabolic process
regulation of steroid metabolic process
cell differentiation
interleukin-17 production
circadian regulation of gene expression
T cell differentiation in thymus
cellular response to sterol
T-helper cell differentiation
positive regulation of circadian rhythm
steroid hormone mediated signaling pathway
regulation of gamma-delta T cell differentiation
regulation of fat cell differentiation
positive regulation of transcription, DNA-templated
alpha-beta T cell differentiation
rhythmic process
lymph node development
mucosal-associated lymphoid tissue development
Peyer's patch development
adipose tissue development
regulation of transcription involved in cell fate commitment
negative regulation of thymocyte apoptotic process
T-helper 17 cell differentiation

Function(s)

transcription coactivator binding
DNA binding
transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
oxysterol binding
zinc ion binding
sequence-specific DNA binding
metal ion binding
transcription factor activity, direct ligand regulated sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300006595.mm.1	NM_011281.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006595.mm.1	TC0300000864.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0300006596.mm.1	NM_011281.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0300006596.mm.1	TC0300000864.mm.1	MTA TC