Mm01287541_m1

• Gene Symbol: Prrx1
• Gene Name: paired related homeobox 1
• Gene Aliases: A230024N07Rik, AA755424, AI385634, AI843499, K-2, Pmx, Pmx1, Prx1, mHox
• Chromosome Location: Chr.1: 163245119 - 163313705 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prrx1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_175686.3	NP_783617.2	3 - 4	1612		112
GenBank mRNA	AK008428.2	-	4 - 5	442		112
	AK019503.1	-	3 - 4	423		112
	BC092372.1	-	3 - 4	961	30533016	112
	L06502.1	-	3 - 4	777		112
	U03873.1	-	3 - 4	1618		112

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100003409.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prrx1

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
positive regulation of mesenchymal cell proliferation
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
multicellular organism development
embryonic limb morphogenesis
inner ear morphogenesis
middle ear morphogenesis
positive regulation of smoothened signaling pathway
positive regulation of transcription from RNA polymerase II promoter
neuron fate determination
embryonic cranial skeleton morphogenesis
embryonic skeletal system morphogenesis
artery morphogenesis
cartilage development
palate development
regulation of neuron projection regeneration
neuronal stem cell population maintenance

Function(s)

RNA polymerase II transcription coactivator activity
DNA binding
sequence-specific DNA binding
HMG box domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100027978.mm.1	NM_175686.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100027978.mm.1	NM_175686.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0100027978.mm.1	TC0100003409.mm.1	MTA TC