Mm01291224_m1

• Gene Symbol: Sox2ot
• Gene Name: SOX2 overlapping transcript (non-protein coding)
• Gene Aliases: B230215L15Rik
• Chromosome Location: Chr.3: 34560381 - 34677993 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Sox2ot
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015580.2		2 - 3	257		74
GenBank mRNA	BC057611.1	-	2 - 3	257		74

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU702442.1	-	2 - 3	256		Chr. 3 - 34560381 - 34675792 [+] on Build GRCm38	74

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	microRNA 1897	Mir1897	Mirn1897, mmu-mir-1897		Sense	Chr. 3 - 34638464 - 34638542 on NCBI Build GRCm38
Downstream	SRY (sex determining region Y)-box 2	Sox2	Sox-2, lcc, ysb	11.4kb	Sense	Chr. 3 - 34650005 - 34652461 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0300000238.mm.1

• Set Membership: Amplicon length between 71 and 85, Mammalian Gene Collection, Mus musculus, Probe spans exons

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300001551.mm.1	NR_015580.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300001551.mm.1	NR_035433.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300001551.mm.1	NR_035433.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300001551.mm.1	TC0300000238.mm.1	MTA TC