Mm01305287_g1

• Gene Symbol: Gm5478
• Gene Name: predicted pseudogene 5478
• Gene Aliases: EG432987
• Chromosome Location: Chr.15: 101643019 - 101647380 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gm5478
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_003960.1		6 - 7	2294		74
GenBank mRNA	BC046626.1	-	6 - 7	2294		74

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	predicted gene 5414	Gm5414	EG406223, Kb14	-14.8kb	Sense	Chr. 15 - 101624028 - 101628188 on NCBI Build GRCm38
Downstream	keratin 6B	Krt6b	BB144589, Krt2-6b, mK6[b]	31.6kb	Sense	Chr. 15 - 101676023 - 101680289 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002267.mm.1

• Set Membership: Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2001403	BC046626.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2001403	NR_003960.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P240956	BC046626.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P240956	NR_003960.1	mouse_transcriptome

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10432770	-	-
Affymetrix Mouse Gene 1.0 ST Array	10432769	-	-
Affymetrix Mouse Gene 1.0 ST Array	10432773	-	-
Affymetrix Mouse Gene 1.0 ST Array	10432768	-	-
Affymetrix Mouse Gene 1.0 ST Array	10432772	-	-
Affymetrix Mouse Gene 1.0 ST Array	10432771	-	-
Affymetrix Mouse Gene 1.1 ST Array	10432767	-	-
Affymetrix Mouse Clariom S Array	PSR1500018646.mm.1	NR_003960.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018646.mm.1	TC1500002267.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500018645.mm.1	NR_003960.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500018645.mm.1	TC1500002267.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	445414	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina mouseRef-8 v1.1 expression beadchip	ILMN_3161002	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_3161002	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_3161002	-	-